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An introduction to the phyloregion package4 years ago
nocite: |@Daru2020, @Daru2017 | 1. Installation | 2. Overview and general workflow of phyloregion | 3. Input data | Phylogenies | Distribution data input | Function points2comm | Function polys2comm | Function rast2comm | 4. Analysis | Alpha diversity | Function weighted_endemism | Function PD – phylogenetic diversity | Function phylo_endemism – phylogenetic endemism | Function EDGE – Evolutionary Distinctiveness and Global Endangerment | Analysis of beta diversity (phylogenetic and non-phylogenetic) | Phylogenetic beta diversity | Session Information | REFERENCES
Benchmarking phyloregion4 years ago
Benchmarking phyloregion with comparable packages | 1. Analysis of alpha diversity | 1.1. Benchmarking phyloregion for analysis of phylogenetic diversity | 1.2. Benchmarking phyloregion for analysis of phylogenetic endemism | 2. Analysis of compositional turnover (beta diversity) | 2.1. Benchmarking phyloregion for analysis of taxonomic beta diversity | 2.2. Benchmarking phyloregion for analysis of phylogenetic beta diversity | Session Information | REFERENCES
Fast Evolutionary Distinctiveness4 years ago
Introduction